Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 AL355864.2-201ENST00000447420 863 ntBASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 TPT1P11-201ENST00000458482 498 ntBASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 RN7SL219P-201ENST00000582872 296 ntBASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 AC099521.3-201ENST00000624251 2938 ntBASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
DDX49Q9Y6V7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
DDX49Q9Y6V7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
DDX49Q9Y6V7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
DDX49Q9Y6V7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.71■□□□□ 0.42
DDX49Q9Y6V7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DDX49Q9Y6V7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DDX49Q9Y6V7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.71■□□□□ 0.42
DDX49Q9Y6V7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 RPL13AP25-201ENST00000484130 612 ntBASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 AP001063.1-201ENST00000568332 529 ntBASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 AC105206.1-202ENST00000314927 2368 ntBASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
DDX49Q9Y6V7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 AC108725.1-201ENST00000495472 409 ntBASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 AP000812.2-201ENST00000538934 718 ntBASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms