Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RBPMS2P1-201ENST00000437762 623 ntBASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AC004461.2-201ENST00000629517 803 ntBASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 IL9RP2-201ENST00000423948 1312 ntBASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RCL1Q9Y2P8 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 NCLP1-201ENST00000445357 1963 ntBASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 C20orf181-201ENST00000623918 480 ntBASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms