Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 CU633904.3-201ENST00000624042 1029 ntBASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 AC067931.2-201ENST00000623655 2003 ntBASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NPC1L1Q9UHC9 GRK6P1-201ENST00000400595 1711 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 KRT17P5-201ENST00000332088 839 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 MIR645-201ENST00000385283 94 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 Z97180.1-201ENST00000445173 988 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 DUTP3-201ENST00000450025 415 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 CEP164P1-201ENST00000455142 418 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 NDUFS6P1-201ENST00000485187 316 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 AC105129.2-201ENST00000559536 390 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 AC009560.1-201ENST00000620208 434 ntBASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1L1Q9UHC9 FAM90A2P-201ENST00000511144 1395 ntBASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 FAM90A25P-201ENST00000528404 1395 ntBASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC19.33■□□□□ 0.68
NPC1L1Q9UHC9 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 OR2K2-202ENST00000374428 1038 ntBASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 SLC25A24P2-201ENST00000415059 510 ntBASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 RN7SL67P-201ENST00000492147 296 ntBASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 RTN3P1-201ENST00000536295 711 ntBASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 AL021578.1-201ENST00000613646 709 ntBASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 RCC2P1-201ENST00000452257 1476 ntBASIC19.32■□□□□ 0.68
NPC1L1Q9UHC9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms