Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC119751.2-201ENST00000504529 210 ntBASIC12.88□□□□□ -0.35
CDH20Q9HBT6 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 AP003171.2-201ENST00000528208 925 ntBASIC12.88□□□□□ -0.35
CDH20Q9HBT6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 MIR4683-201ENST00000579659 81 ntBASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 BNIP3P42-201ENST00000454982 569 ntBASIC12.87□□□□□ -0.35
CDH20Q9HBT6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 C2orf69P2-201ENST00000562032 1123 ntBASIC12.87□□□□□ -0.35
CDH20Q9HBT6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 MIR4259-201ENST00000584466 101 ntBASIC12.87□□□□□ -0.35
CDH20Q9HBT6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 BNIP3P29-201ENST00000598302 571 ntBASIC12.87□□□□□ -0.35
CDH20Q9HBT6 AL136301.1-201ENST00000615830 422 ntBASIC12.87□□□□□ -0.35
CDH20Q9HBT6 AC011447.5-201ENST00000616168 564 ntBASIC12.87□□□□□ -0.35
CDH20Q9HBT6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 AC005252.3-201ENST00000623855 2258 ntBASIC12.87□□□□□ -0.35
CDH20Q9HBT6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 AC009093.2-202ENST00000620513 2079 ntBASIC12.87□□□□□ -0.35
CDH20Q9HBT6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms