Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 AC008825.2-201ENST00000603374 718 ntBASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 AL354718.3-201ENST00000616414 581 ntBASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 CR382287.1-201ENST00000623954 586 ntBASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO3Q9BXY4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 COL6A4P2-202ENST00000504443 2753 ntBASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 MIR326-201ENST00000362220 95 ntBASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 AL157407.1-201ENST00000435784 904 ntBASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 PPY2P-201ENST00000582808 702 ntBASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 AC073548.1-201ENST00000624088 1882 ntBASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 AC027612.1-201ENST00000445234 2395 ntBASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 AL008718.2-201ENST00000609206 1313 ntBASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO3Q9BXY4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms