Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 ATG10-IT1-201ENST00000396880 487 ntBASIC13.32□□□□□ -0.28
USB1Q9BQ65 AC099336.1-201ENST00000417053 1171 ntBASIC13.32□□□□□ -0.28
USB1Q9BQ65 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AC245100.3-201ENST00000441281 285 ntBASIC13.32□□□□□ -0.28
USB1Q9BQ65 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AC122713.1-201ENST00000518368 1015 ntBASIC13.32□□□□□ -0.28
USB1Q9BQ65 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AL583810.1-201ENST00000553344 1045 ntBASIC13.32□□□□□ -0.28
USB1Q9BQ65 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AC010328.2-201ENST00000597698 1111 ntBASIC13.32□□□□□ -0.28
USB1Q9BQ65 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AL162574.2-201ENST00000614618 657 ntBASIC13.32□□□□□ -0.28
USB1Q9BQ65 ENPP7P14-201ENST00000621765 1040 ntBASIC13.32□□□□□ -0.28
USB1Q9BQ65 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
USB1Q9BQ65 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.32□□□□□ -0.28
USB1Q9BQ65 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 PPP2R2DP1-201ENST00000420526 637 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC007274.1-201ENST00000439805 662 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 PFN1P12-201ENST00000455938 534 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 MIR4259-201ENST00000584466 101 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms