Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ABCA3Q99758 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC18.65■□□□□ 0.58
ABCA3Q99758 AC084018.2-201ENST00000613093 2607 ntBASIC18.65■□□□□ 0.58
ABCA3Q99758 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ABCA3Q99758 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCA3Q99758 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCA3Q99758 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCA3Q99758 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 AC139100.2-201ENST00000616901 662 ntBASIC18.65■□□□□ 0.58
ABCA3Q99758 AL512324.3-201ENST00000619383 882 ntBASIC18.65■□□□□ 0.58
ABCA3Q99758 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCA3Q99758 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ABCA3Q99758 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.65■□□□□ 0.58
ABCA3Q99758 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.64■□□□□ 0.58
ABCA3Q99758 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ABCA3Q99758 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ABCA3Q99758 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.64■□□□□ 0.58
ABCA3Q99758 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCA3Q99758 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ABCA3Q99758 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
ABCA3Q99758 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCA3Q99758 GH1-203ENST00000351388 685 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCA3Q99758 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCA3Q99758 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCA3Q99758 POLR2LP1-206ENST00000444785 187 ntBASIC18.64■□□□□ 0.57
ABCA3Q99758 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCA3Q99758 OR4A49P-201ENST00000527050 632 ntBASIC18.64■□□□□ 0.57
ABCA3Q99758 MBP-230ENST00000528160 584 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCA3Q99758 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCA3Q99758 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCA3Q99758 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCA3Q99758 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ABCA3Q99758 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCA3Q99758 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCA3Q99758 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ABCA3Q99758 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCA3Q99758 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC18.63■□□□□ 0.57
ABCA3Q99758 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 FTH1P18-201ENST00000412071 549 ntBASIC18.63■□□□□ 0.57
ABCA3Q99758 AC000077.1-201ENST00000420012 953 ntBASIC18.63■□□□□ 0.57
ABCA3Q99758 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 CD37-203ENST00000426897 1204 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 AC090820.1-201ENST00000519722 591 ntBASIC18.63■□□□□ 0.57
ABCA3Q99758 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 RN7SL605P-201ENST00000577229 281 ntBASIC18.63■□□□□ 0.57
ABCA3Q99758 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 AJ011931.1-201ENST00000618749 2492 ntBASIC18.63■□□□□ 0.57
ABCA3Q99758 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 DNM1P46-202ENST00000415963 882 ntBASIC18.63■□□□□ 0.57
ABCA3Q99758 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC18.63■□□□□ 0.57
ABCA3Q99758 MARK2P17-201ENST00000498560 841 ntBASIC18.63■□□□□ 0.57
ABCA3Q99758 AC026412.1-206ENST00000502273 206 ntBASIC18.63■□□□□ 0.57
ABCA3Q99758 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC18.63■□□□□ 0.57
ABCA3Q99758 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCA3Q99758 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCA3Q99758 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCA3Q99758 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ABCA3Q99758 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCA3Q99758 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCA3Q99758 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCA3Q99758 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms