Protein–RNA interactions for Protein: Q99471

PFDN5, Prefoldin subunit 5, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5Q99471 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.98□□□□□ -0.49
PFDN5Q99471 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
PFDN5Q99471 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.98□□□□□ -0.49
PFDN5Q99471 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PFDN5Q99471 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PFDN5Q99471 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
PFDN5Q99471 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PFDN5Q99471 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 AC018529.2-202ENST00000611482 3087 ntBASIC11.97□□□□□ -0.49
PFDN5Q99471 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PFDN5Q99471 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PFDN5Q99471 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PFDN5Q99471 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
PFDN5Q99471 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 AC004945.1-201ENST00000416738 983 ntBASIC11.97□□□□□ -0.49
PFDN5Q99471 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.97□□□□□ -0.49
PFDN5Q99471 MED15P5-201ENST00000423150 992 ntBASIC11.97□□□□□ -0.49
PFDN5Q99471 KRT18P3-201ENST00000451602 1288 ntBASIC11.97□□□□□ -0.49
PFDN5Q99471 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.97□□□□□ -0.49
PFDN5Q99471 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.97□□□□□ -0.49
PFDN5Q99471 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 AC027601.4-201ENST00000611259 610 ntBASIC11.97□□□□□ -0.49
PFDN5Q99471 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.97□□□□□ -0.49
PFDN5Q99471 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PFDN5Q99471 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PFDN5Q99471 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
PFDN5Q99471 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 AC020658.7-201ENST00000624274 2442 ntBASIC11.97□□□□□ -0.49
PFDN5Q99471 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.97□□□□□ -0.49
PFDN5Q99471 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PFDN5Q99471 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.97□□□□□ -0.49
PFDN5Q99471 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PFDN5Q99471 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.96□□□□□ -0.49
PFDN5Q99471 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.96□□□□□ -0.49
PFDN5Q99471 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.96□□□□□ -0.49
PFDN5Q99471 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.96□□□□□ -0.49
PFDN5Q99471 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
PFDN5Q99471 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
PFDN5Q99471 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
PFDN5Q99471 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
PFDN5Q99471 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
PFDN5Q99471 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.96□□□□□ -0.49
PFDN5Q99471 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.96□□□□□ -0.49
PFDN5Q99471 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC11.96□□□□□ -0.49
PFDN5Q99471 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PFDN5Q99471 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms