Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM5Q96HC4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM5Q96HC4 AL023775.1-201ENST00000454907 1746 ntBASIC14.27□□□□□ -0.13
PDLIM5Q96HC4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM5Q96HC4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 USP17L6P-201ENST00000382470 1197 ntBASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 AC079178.1-201ENST00000420915 656 ntBASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 AC234783.1-201ENST00000441761 496 ntBASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 RAB43P1-201ENST00000561790 589 ntBASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 DUX4L45-201ENST00000566406 1057 ntBASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 MIR4783-201ENST00000580343 82 ntBASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PDLIM5Q96HC4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 AL008718.2-201ENST00000609206 1313 ntBASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 U91328.1-201ENST00000437528 223 ntBASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 AC104989.1-201ENST00000519711 778 ntBASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 AC244394.1-201ENST00000435000 1665 ntBASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.25□□□□□ -0.13
PDLIM5Q96HC4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms