Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 AC244394.1-201ENST00000435000 1665 ntBASIC13.01□□□□□ -0.33
APH1AQ96BI3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APH1AQ96BI3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APH1AQ96BI3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13□□□□□ -0.33
APH1AQ96BI3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
APH1AQ96BI3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 AGGF1P1-201ENST00000509500 2073 ntBASIC13□□□□□ -0.33
APH1AQ96BI3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13□□□□□ -0.33
APH1AQ96BI3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 KRT8P28-201ENST00000433288 1390 ntBASIC13□□□□□ -0.33
APH1AQ96BI3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13□□□□□ -0.33
APH1AQ96BI3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
APH1AQ96BI3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13□□□□□ -0.33
APH1AQ96BI3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 AC106794.1-201ENST00000506935 792 ntBASIC13□□□□□ -0.33
APH1AQ96BI3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13□□□□□ -0.33
APH1AQ96BI3 AC126915.1-201ENST00000522847 1038 ntBASIC13□□□□□ -0.33
APH1AQ96BI3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13□□□□□ -0.33
APH1AQ96BI3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13□□□□□ -0.33
APH1AQ96BI3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
APH1AQ96BI3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13□□□□□ -0.33
APH1AQ96BI3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13□□□□□ -0.33
APH1AQ96BI3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APH1AQ96BI3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 AL390755.1-201ENST00000623716 2027 ntBASIC13□□□□□ -0.33
APH1AQ96BI3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
APH1AQ96BI3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 AC113367.3-201ENST00000508316 1912 ntBASIC13□□□□□ -0.33
APH1AQ96BI3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13□□□□□ -0.33
APH1AQ96BI3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms