Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 IGLV3-15-201ENST00000518356 244 ntBASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 POU5F1P2-201ENST00000521750 823 ntBASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 AC242376.1-201ENST00000559033 726 ntBASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP6V0A1Q93050 AGGF1P1-201ENST00000509500 2073 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AC239868.1-201ENST00000369385 493 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 CEP164P1-201ENST00000455142 418 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AC027237.1-201ENST00000560942 655 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AC006453.1-201ENST00000636037 1257 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 MYADML-201ENST00000474610 2147 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 KRT8P21-201ENST00000430398 1491 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 CYP4F23P-201ENST00000593402 1579 ntBASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATP6V0A1Q93050 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP6V0A1Q93050 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP6V0A1Q93050 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.33■□□□□ 0.21
ATP6V0A1Q93050 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ATP6V0A1Q93050 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ATP6V0A1Q93050 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP6V0A1Q93050 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms