Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AL645937.2-201ENST00000396808 931 ntBASIC12.95□□□□□ -0.34
AP3S1Q92572 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S1Q92572 HLA-K-203ENST00000430151 1046 ntBASIC12.95□□□□□ -0.34
AP3S1Q92572 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
AP3S1Q92572 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
AP3S1Q92572 SLC25A39P2-201ENST00000537614 270 ntBASIC12.95□□□□□ -0.34
AP3S1Q92572 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.95□□□□□ -0.34
AP3S1Q92572 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S1Q92572 AC026150.2-201ENST00000564693 1156 ntBASIC12.95□□□□□ -0.34
AP3S1Q92572 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
AP3S1Q92572 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 AC116407.3-201ENST00000623905 1129 ntBASIC12.95□□□□□ -0.34
AP3S1Q92572 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
AP3S1Q92572 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S1Q92572 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S1Q92572 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S1Q92572 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S1Q92572 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S1Q92572 AC015688.4-201ENST00000580780 1647 ntBASIC12.95□□□□□ -0.34
AP3S1Q92572 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
AP3S1Q92572 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
AP3S1Q92572 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.94□□□□□ -0.34
AP3S1Q92572 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 RPL13P2-201ENST00000440687 659 ntBASIC12.94□□□□□ -0.34
AP3S1Q92572 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S1Q92572 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S1Q92572 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S1Q92572 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S1Q92572 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 BANF1P1-201ENST00000553684 263 ntBASIC12.94□□□□□ -0.34
AP3S1Q92572 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.94□□□□□ -0.34
AP3S1Q92572 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 AC026120.1-201ENST00000611536 926 ntBASIC12.94□□□□□ -0.34
AP3S1Q92572 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S1Q92572 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S1Q92572 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 AC084121.4-201ENST00000641598 221 ntBASIC12.94□□□□□ -0.34
AP3S1Q92572 AF228730.8-201ENST00000642140 221 ntBASIC12.94□□□□□ -0.34
AP3S1Q92572 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S1Q92572 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S1Q92572 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
AP3S1Q92572 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
AP3S1Q92572 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
AP3S1Q92572 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S1Q92572 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
AP3S1Q92572 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 Z98257.2-202ENST00000641138 1548 ntBASIC12.93□□□□□ -0.34
AP3S1Q92572 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms