Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHKBP1Q8TBC3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 AC133540.1-201ENST00000620845 1019 ntBASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 AC006480.2-201ENST00000609770 1337 ntBASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHKBP1Q8TBC3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms