Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AHCYP4-201ENST00000419201 1315 ntBASIC15.71■□□□□ 0.11
BEST2Q8NFU1 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AL157791.1-201ENST00000553667 1699 ntBASIC15.71■□□□□ 0.11
BEST2Q8NFU1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.71■□□□□ 0.11
BEST2Q8NFU1 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 CHMP4BP1-201ENST00000556017 588 ntBASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 RN7SL774P-201ENST00000577467 290 ntBASIC15.71■□□□□ 0.11
BEST2Q8NFU1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 MIR6074-201ENST00000612054 107 ntBASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST2Q8NFU1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
BEST2Q8NFU1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.71■□□□□ 0.1
BEST2Q8NFU1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
BEST2Q8NFU1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
BEST2Q8NFU1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
BEST2Q8NFU1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
BEST2Q8NFU1 AC215219.1-201ENST00000400706 1817 ntBASIC15.71■□□□□ 0.1
BEST2Q8NFU1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
BEST2Q8NFU1 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 XBP1P1-201ENST00000436573 652 ntBASIC15.7■□□□□ 0.1
BEST2Q8NFU1 RN7SL11P-201ENST00000471305 293 ntBASIC15.7■□□□□ 0.1
BEST2Q8NFU1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST2Q8NFU1 AC005586.2-201ENST00000563946 837 ntBASIC15.7■□□□□ 0.1
BEST2Q8NFU1 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms