Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 AC234644.1-201ENST00000406065 370 ntBASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 HLA-K-203ENST00000430151 1046 ntBASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 RPL8P2-201ENST00000430538 502 ntBASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 AC130709.1-201ENST00000484779 1212 ntBASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 AC026434.2-201ENST00000506094 1078 ntBASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 IGHV3-37-201ENST00000518544 340 ntBASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF248Q8NDW4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 AC078875.1-201ENST00000431907 724 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 AC026320.2-201ENST00000434379 478 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 RBM8B-201ENST00000555532 525 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 AC138894.2-201ENST00000602838 371 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 AC007718.1-201ENST00000621078 280 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 CAP2P1-201ENST00000557743 1390 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 MBLAC2-202ENST00000514906 1936 ntBASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF248Q8NDW4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms