Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 AL354718.3-201ENST00000616414 581 ntBASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 CR382287.1-201ENST00000623954 586 ntBASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 TCAM1P-207ENST00000485295 1537 ntBASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LSMEM1Q8N8F7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 USP32P1-208ENST00000506594 1164 ntBASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 AC233724.13-201ENST00000598383 410 ntBASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 AL022328.1-201ENST00000610050 478 ntBASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 AOC4P-203ENST00000566825 2289 ntBASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 AL359881.3-201ENST00000602640 1721 ntBASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
LSMEM1Q8N8F7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 AC012617.1-204ENST00000586340 2305 ntBASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 AC009093.2-202ENST00000620513 2079 ntBASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms