Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 CICP23-201ENST00000605013 2741 ntBASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AC018463.1-201ENST00000456674 917 ntBASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 NDUFS6P1-201ENST00000485187 316 ntBASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AP003398.1-201ENST00000531124 318 ntBASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 AC007326.1-201ENST00000604539 458 ntBASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 MIR6858-201ENST00000620733 67 ntBASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNPOQ8N3V7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 AC009093.10-201ENST00000641956 1442 ntBASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.83□□□□□ -0.03
SYNPOQ8N3V7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AP000845.1-201ENST00000581677 2131 ntBASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 Z69890.1-201ENST00000382990 339 ntBASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AC097065.1-201ENST00000425737 517 ntBASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AC092638.2-201ENST00000441105 947 ntBASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 FTH1P22-201ENST00000456305 520 ntBASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 RPL18AP3-201ENST00000462885 528 ntBASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 AP001184.1-201ENST00000637936 376 ntBASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SYNPOQ8N3V7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms