Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 AC128714.1-201ENST00000637035 887 ntBASIC15.95■□□□□ 0.14
VPS52Q8N1B4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 LINC01101-201ENST00000622953 1884 ntBASIC15.95■□□□□ 0.14
VPS52Q8N1B4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AL596276.2-201ENST00000447525 331 ntBASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AF254983.2-201ENST00000612331 135 ntBASIC15.94■□□□□ 0.14
VPS52Q8N1B4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 MROH4P-201ENST00000431302 1578 ntBASIC15.94■□□□□ 0.14
VPS52Q8N1B4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS52Q8N1B4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.93■□□□□ 0.14
VPS52Q8N1B4 MIR33B-201ENST00000385104 96 ntBASIC15.93■□□□□ 0.14
VPS52Q8N1B4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms