Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC170Q8IYT3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 CICP20-201ENST00000443330 2801 ntBASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 CLUHP2-201ENST00000426660 1303 ntBASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 AC027612.1-201ENST00000445234 2395 ntBASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 AC245100.3-201ENST00000441281 285 ntBASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 AP001063.1-201ENST00000568332 529 ntBASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 AC099521.3-201ENST00000624251 2938 ntBASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
CCDC170Q8IYT3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 CR383656.2-201ENST00000548656 2254 ntBASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 MIR1233-2-201ENST00000408138 82 ntBASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 MIR1233-1-201ENST00000408722 82 ntBASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 PUDPP3-201ENST00000445368 636 ntBASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 TMEM261P1-201ENST00000604899 340 ntBASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms