Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MIR4525-201ENST00000580000 75 ntBASIC14.07□□□□□ -0.16
RNF44Q7L0R7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AL022328.3-201ENST00000607943 679 ntBASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AC022748.3-201ENST00000621828 275 ntBASIC14.07□□□□□ -0.16
RNF44Q7L0R7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AC009093.10-201ENST00000641956 1442 ntBASIC14.07□□□□□ -0.16
RNF44Q7L0R7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AC015688.4-201ENST00000580780 1647 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AL157407.1-201ENST00000435784 904 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AC012441.2-201ENST00000444843 739 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 KLF2P1-201ENST00000447438 1042 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AC021723.1-201ENST00000486306 515 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AC126915.1-201ENST00000522847 1038 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AC005324.6-201ENST00000587972 613 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 BNIP3P13-201ENST00000599968 566 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AC243960.2-201ENST00000600996 747 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 Z98259.2-201ENST00000641583 609 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AL390755.1-201ENST00000623716 2027 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 AL008718.2-201ENST00000609206 1313 ntBASIC14.06□□□□□ -0.16
RNF44Q7L0R7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF44Q7L0R7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms