Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 HMGN1P19-201ENST00000436976 333 ntBASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 RN7SL399P-201ENST00000471648 279 ntBASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 RN7SL204P-201ENST00000582831 262 ntBASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 AC025181.2-201ENST00000606994 802 ntBASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 AC099568.2-201ENST00000609194 695 ntBASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TMEM53Q6P2H8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC015818.8-201ENST00000587907 1519 ntBASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AL353779.1-201ENST00000434793 351 ntBASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AC093726.1-201ENST00000608064 963 ntBASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM53Q6P2H8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms