Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 TUBB3P1-201ENST00000405796 1332 ntBASIC11.73□□□□□ -0.53
FAM78BQ5VT40 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 AC114271.1-201ENST00000612689 2813 ntBASIC11.73□□□□□ -0.53
FAM78BQ5VT40 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.73□□□□□ -0.53
FAM78BQ5VT40 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 CSPG4P11-201ENST00000560634 4910 ntBASIC11.72□□□□□ -0.53
FAM78BQ5VT40 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AC004241.5-201ENST00000623870 2448 ntBASIC11.72□□□□□ -0.53
FAM78BQ5VT40 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AL139400.1-201ENST00000366220 510 ntBASIC11.72□□□□□ -0.53
FAM78BQ5VT40 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AC125807.1-201ENST00000483097 614 ntBASIC11.72□□□□□ -0.53
FAM78BQ5VT40 TMEM198B-204ENST00000484016 896 ntBASIC11.72□□□□□ -0.53
FAM78BQ5VT40 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 AP001160.2-201ENST00000596071 487 ntBASIC11.72□□□□□ -0.53
FAM78BQ5VT40 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms