Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 RNA5SP491-201ENST00000362936 118 ntBASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 AL080243.1-201ENST00000423293 1060 ntBASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 IFNWP2-201ENST00000431203 580 ntBASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 GALP-202ENST00000440823 889 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 GULOP-201ENST00000454030 748 ntBASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 COQ10BP2-201ENST00000513804 724 ntBASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 AL591424.3-201ENST00000614278 872 ntBASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 AF274858.1-201ENST00000406288 372 ntBASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 AC005722.1-201ENST00000431878 964 ntBASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 NALT1-202ENST00000450304 437 ntTSL 3 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42BPAQ5VT25 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 AC018695.6-201ENST00000614011 534 ntBASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 MME-218ENST00000625667 363 ntTSL 5 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 VDAC1P11-201ENST00000458323 852 ntBASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CDC42BPAQ5VT25 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 ASS1P2-201ENST00000439895 1223 ntBASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms