Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AL031595.1-201ENST00000623969 4709 ntBASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 CU639417.3-201ENST00000624240 1404 ntBASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AL354702.1-201ENST00000442006 1960 ntBASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AL035633.1-201ENST00000406139 838 ntBASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 TMEM198B-204ENST00000484016 896 ntBASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AC009486.1-201ENST00000569860 813 ntBASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AP005019.2-201ENST00000615104 511 ntBASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 AC005562.1-201ENST00000583030 3219 ntBASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATPAF1Q5TC12 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 DMBT1P1-203ENST00000636837 4628 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AC015818.8-201ENST00000587907 1519 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 ACTG1P3-201ENST00000431775 1114 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 RN7SL752P-201ENST00000463779 287 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 RN7SL692P-201ENST00000464677 288 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AP005018.1-201ENST00000525475 301 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 CR383656.12-201ENST00000549567 513 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 CLUHP6-201ENST00000580789 941 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms