Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 FAM90A7P-201ENST00000382628 1395 ntBASIC17.07■□□□□ 0.32
CCDC96Q2M329 FAM90A23P-201ENST00000400136 1395 ntBASIC17.07■□□□□ 0.32
CCDC96Q2M329 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.07■□□□□ 0.32
CCDC96Q2M329 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 AC125604.1-201ENST00000496255 707 ntBASIC17.07■□□□□ 0.32
CCDC96Q2M329 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 AC139712.1-201ENST00000378256 1875 ntBASIC17.07■□□□□ 0.32
CCDC96Q2M329 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 FGD5P1-202ENST00000614866 2498 ntBASIC17.07■□□□□ 0.32
CCDC96Q2M329 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC96Q2M329 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC96Q2M329 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 TMBIM7P-202ENST00000641474 1516 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 MTHFR-210ENST00000641407 2387 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 Z97180.1-201ENST00000445173 988 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 AC009779.1-201ENST00000551138 283 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 AC103988.2-201ENST00000561804 725 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 RN7SL774P-201ENST00000577467 290 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 AL132994.2-201ENST00000603120 687 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 AP000346.4-201ENST00000614827 381 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 CICP14-201ENST00000629111 2732 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 AC144522.1-201ENST00000625111 1658 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC96Q2M329 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC96Q2M329 INTS4P1-203ENST00000641008 3683 ntBASIC17.06■□□□□ 0.32
CCDC96Q2M329 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 AL008707.1-201ENST00000422498 534 ntBASIC17.05■□□□□ 0.32
CCDC96Q2M329 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms