Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.48□□□□□ -0.41
EFNB3Q15768 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
EFNB3Q15768 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 CYP4F23P-201ENST00000593402 1579 ntBASIC12.48□□□□□ -0.41
EFNB3Q15768 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.48□□□□□ -0.41
EFNB3Q15768 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB3Q15768 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 AC008132.1-202ENST00000342005 1389 ntBASIC12.48□□□□□ -0.41
EFNB3Q15768 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
EFNB3Q15768 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
EFNB3Q15768 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 AHCYP4-201ENST00000419201 1315 ntBASIC12.48□□□□□ -0.41
EFNB3Q15768 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
EFNB3Q15768 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 ACTG1P2-201ENST00000415776 1125 ntBASIC12.48□□□□□ -0.41
EFNB3Q15768 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 ACTG1P11-201ENST00000425411 1125 ntBASIC12.48□□□□□ -0.41
EFNB3Q15768 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB3Q15768 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.48□□□□□ -0.41
EFNB3Q15768 UPF3AP2-201ENST00000457924 1132 ntBASIC12.48□□□□□ -0.41
EFNB3Q15768 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.48□□□□□ -0.41
EFNB3Q15768 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB3Q15768 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB3Q15768 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.48□□□□□ -0.41
EFNB3Q15768 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB3Q15768 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
EFNB3Q15768 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
EFNB3Q15768 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 GRK6P1-201ENST00000400595 1711 ntBASIC12.48□□□□□ -0.41
EFNB3Q15768 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
EFNB3Q15768 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB3Q15768 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB3Q15768 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
EFNB3Q15768 AC139749.1-202ENST00000617529 3139 ntBASIC12.47□□□□□ -0.41
EFNB3Q15768 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB3Q15768 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB3Q15768 XBP1P1-201ENST00000436573 652 ntBASIC12.47□□□□□ -0.41
EFNB3Q15768 AL353637.1-201ENST00000451571 732 ntBASIC12.47□□□□□ -0.41
EFNB3Q15768 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 RN7SL769P-201ENST00000469386 295 ntBASIC12.47□□□□□ -0.41
EFNB3Q15768 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.47□□□□□ -0.41
EFNB3Q15768 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.47□□□□□ -0.41
EFNB3Q15768 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.47□□□□□ -0.41
EFNB3Q15768 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB3Q15768 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.47□□□□□ -0.41
EFNB3Q15768 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
EFNB3Q15768 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms