Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 HIST3H2BA-201ENST00000436555 524 ntBASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 HCG4B-203ENST00000450128 991 ntBASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 AL096865.1-201ENST00000606796 927 ntBASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 MEX3B-202ENST00000558133 4333 ntBASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 PCDHA5-203ENST00000614258 4248 ntBASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC173Q0VFZ6 AP001972.5-201ENST00000624624 2338 ntBASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 AL391647.1-201ENST00000395664 511 ntBASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 AL355102.3-201ENST00000554299 1678 ntBASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC173Q0VFZ6 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 AC027307.2-201ENST00000591252 911 ntBASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC173Q0VFZ6 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms