Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC18.88■□□□□ 0.61
COL16A1Q07092 KLK8-203ENST00000347619 555 ntTSL 2 BASIC18.88■□□□□ 0.61
COL16A1Q07092 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 SNORD88B-201ENST00000408454 91 ntBASIC18.88■□□□□ 0.61
COL16A1Q07092 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC18.88■□□□□ 0.61
COL16A1Q07092 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC18.88■□□□□ 0.61
COL16A1Q07092 HNRNPA1P59-201ENST00000430583 918 ntBASIC18.88■□□□□ 0.61
COL16A1Q07092 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC18.88■□□□□ 0.61
COL16A1Q07092 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
COL16A1Q07092 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.88■□□□□ 0.61
COL16A1Q07092 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC18.88■□□□□ 0.61
COL16A1Q07092 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC18.88■□□□□ 0.61
COL16A1Q07092 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.88■□□□□ 0.61
COL16A1Q07092 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL16A1Q07092 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.87■□□□□ 0.61
COL16A1Q07092 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.87■□□□□ 0.61
COL16A1Q07092 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 AIRN-201ENST00000601203 4374 ntBASIC18.87■□□□□ 0.61
COL16A1Q07092 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.87■□□□□ 0.61
COL16A1Q07092 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC18.87■□□□□ 0.61
COL16A1Q07092 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC18.87■□□□□ 0.61
COL16A1Q07092 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.87■□□□□ 0.61
COL16A1Q07092 PHBP18-201ENST00000546648 813 ntBASIC18.87■□□□□ 0.61
COL16A1Q07092 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC18.87■□□□□ 0.61
COL16A1Q07092 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC18.87■□□□□ 0.61
COL16A1Q07092 DUX4L33-201ENST00000635217 958 ntBASIC18.87■□□□□ 0.61
COL16A1Q07092 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC18.87■□□□□ 0.61
COL16A1Q07092 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL16A1Q07092 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.87■□□□□ 0.61
COL16A1Q07092 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
COL16A1Q07092 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COL16A1Q07092 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.87■□□□□ 0.61
COL16A1Q07092 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL16A1Q07092 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.86■□□□□ 0.61
COL16A1Q07092 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
COL16A1Q07092 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COL16A1Q07092 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.86■□□□□ 0.61
COL16A1Q07092 SFPQP1-201ENST00000446621 1786 ntBASIC18.86■□□□□ 0.61
COL16A1Q07092 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.86■□□□□ 0.61
COL16A1Q07092 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC18.86■□□□□ 0.61
COL16A1Q07092 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC18.86■□□□□ 0.61
COL16A1Q07092 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC18.86■□□□□ 0.61
COL16A1Q07092 AL136298.3-201ENST00000556746 445 ntBASIC18.86■□□□□ 0.61
COL16A1Q07092 MIR5193-201ENST00000584510 109 ntBASIC18.86■□□□□ 0.61
COL16A1Q07092 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC18.86■□□□□ 0.61
COL16A1Q07092 AL031768.1-201ENST00000606542 701 ntBASIC18.86■□□□□ 0.61
COL16A1Q07092 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COL16A1Q07092 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC18.86■□□□□ 0.61
COL16A1Q07092 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.86■□□□□ 0.61
COL16A1Q07092 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COL16A1Q07092 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.86■□□□□ 0.61
COL16A1Q07092 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.86■□□□□ 0.61
COL16A1Q07092 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL16A1Q07092 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC18.86■□□□□ 0.61
COL16A1Q07092 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.86■□□□□ 0.61
COL16A1Q07092 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COL16A1Q07092 AC103592.1-201ENST00000394513 664 ntBASIC18.85■□□□□ 0.61
COL16A1Q07092 SPTLC1P3-201ENST00000403408 259 ntBASIC18.85■□□□□ 0.61
COL16A1Q07092 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC18.85■□□□□ 0.61
COL16A1Q07092 IGHVII-74-1-201ENST00000517572 241 ntBASIC18.85■□□□□ 0.61
COL16A1Q07092 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 AL139317.2-201ENST00000556998 158 ntBASIC18.85■□□□□ 0.61
COL16A1Q07092 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC18.85■□□□□ 0.61
COL16A1Q07092 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms