Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AL023775.1-201ENST00000454907 1746 ntBASIC12.42□□□□□ -0.42
SSBP1Q04837 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 MIR497HG-202ENST00000572453 3838 ntBASIC12.42□□□□□ -0.42
SSBP1Q04837 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP1Q04837 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP1Q04837 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SSBP1Q04837 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 ABCD1P2-201ENST00000429313 1601 ntBASIC12.41□□□□□ -0.42
SSBP1Q04837 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SSBP1Q04837 ELL2P1-201ENST00000413990 1906 ntBASIC12.41□□□□□ -0.42
SSBP1Q04837 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP1Q04837 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP1Q04837 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP1Q04837 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP1Q04837 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP1Q04837 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.41□□□□□ -0.42
SSBP1Q04837 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP1Q04837 AL596442.2-201ENST00000610240 980 ntBASIC12.41□□□□□ -0.42
SSBP1Q04837 TEX28P1-201ENST00000613479 1221 ntBASIC12.41□□□□□ -0.42
SSBP1Q04837 TEX28P2-201ENST00000617764 1221 ntBASIC12.41□□□□□ -0.42
SSBP1Q04837 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 AC009093.7-201ENST00000623853 1223 ntBASIC12.41□□□□□ -0.42
SSBP1Q04837 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP1Q04837 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP1Q04837 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP1Q04837 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SSBP1Q04837 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SSBP1Q04837 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 AL590440.2-201ENST00000641973 1595 ntBASIC12.4□□□□□ -0.42
SSBP1Q04837 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SSBP1Q04837 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 AC114812.1-204ENST00000449669 728 ntBASIC12.4□□□□□ -0.42
SSBP1Q04837 RPL13AP25-201ENST00000484130 612 ntBASIC12.4□□□□□ -0.42
SSBP1Q04837 MEIS3P1-201ENST00000495167 958 ntBASIC12.4□□□□□ -0.42
SSBP1Q04837 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.4□□□□□ -0.42
SSBP1Q04837 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.4□□□□□ -0.42
SSBP1Q04837 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.4□□□□□ -0.42
SSBP1Q04837 AC093520.2-201ENST00000561830 333 ntBASIC12.4□□□□□ -0.42
SSBP1Q04837 AC138761.1-201ENST00000584393 385 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms