Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 AL845472.1-202ENST00000624675 4080 ntBASIC15.3■□□□□ 0.04
CBX1P83916 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC15.29■□□□□ 0.04
CBX1P83916 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 KRT18P1-202ENST00000452408 1331 ntBASIC15.29■□□□□ 0.04
CBX1P83916 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.29■□□□□ 0.04
CBX1P83916 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.29■□□□□ 0.04
CBX1P83916 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.29■□□□□ 0.04
CBX1P83916 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.29■□□□□ 0.04
CBX1P83916 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.29■□□□□ 0.04
CBX1P83916 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CBX1P83916 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CBX1P83916 AL022326.1-202ENST00000641533 845 ntBASIC15.29■□□□□ 0.04
CBX1P83916 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CBX1P83916 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX1P83916 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX1P83916 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CBX1P83916 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX1P83916 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CBX1P83916 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX1P83916 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX1P83916 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CBX1P83916 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 CSPG4P11-201ENST00000560634 4910 ntBASIC15.28■□□□□ 0.04
CBX1P83916 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CBX1P83916 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CBX1P83916 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 NTM-206ENST00000427481 2583 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX1P83916 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CBX1P83916 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX1P83916 AC104457.1-201ENST00000401024 814 ntBASIC15.28■□□□□ 0.04
CBX1P83916 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX1P83916 DUSP5P1-201ENST00000441325 1139 ntBASIC15.28■□□□□ 0.04
CBX1P83916 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.28■□□□□ 0.04
CBX1P83916 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CBX1P83916 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.28■□□□□ 0.04
CBX1P83916 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.28■□□□□ 0.04
CBX1P83916 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.28■□□□□ 0.04
CBX1P83916 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms