Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 SALL4P5-201ENST00000419001 1760 ntBASIC10.42□□□□□ -0.74
RPL39P62891 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 PCDHB18P-202ENST00000526308 3197 ntBASIC10.41□□□□□ -0.74
RPL39P62891 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 AC015688.4-201ENST00000580780 1647 ntBASIC10.41□□□□□ -0.74
RPL39P62891 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.41□□□□□ -0.74
RPL39P62891 SPDYE7P-202ENST00000420373 878 ntBASIC10.41□□□□□ -0.74
RPL39P62891 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.41□□□□□ -0.74
RPL39P62891 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.41□□□□□ -0.74
RPL39P62891 SDHAP3-202ENST00000515467 728 ntBASIC10.41□□□□□ -0.74
RPL39P62891 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 AC092364.2-202ENST00000597012 1073 ntBASIC10.41□□□□□ -0.74
RPL39P62891 NME4-212ENST00000621774 904 ntTSL 3 BASIC10.41□□□□□ -0.74
RPL39P62891 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.41□□□□□ -0.74
RPL39P62891 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.41□□□□□ -0.74
RPL39P62891 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 STK3-218ENST00000617590 2485 ntTSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
RPL39P62891 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
RPL39P62891 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RPL39P62891 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.41□□□□□ -0.74
RPL39P62891 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
RPL39P62891 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
RPL39P62891 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
RPL39P62891 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
RPL39P62891 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.4□□□□□ -0.74
RPL39P62891 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 AL139385.1-201ENST00000611744 3272 ntBASIC10.4□□□□□ -0.74
RPL39P62891 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
RPL39P62891 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.4□□□□□ -0.74
RPL39P62891 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 TUBB3P1-201ENST00000405796 1332 ntBASIC10.4□□□□□ -0.74
RPL39P62891 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
RPL39P62891 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RPL39P62891 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms