Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.39□□□□□ -0.27
CXCR4P61073 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 TSEN15P1-201ENST00000423257 515 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.39□□□□□ -0.27
CXCR4P61073 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 ZNF890P-202ENST00000530367 1156 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.39□□□□□ -0.27
CXCR4P61073 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.39□□□□□ -0.27
CXCR4P61073 AC092865.5-201ENST00000545435 363 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 AC092337.1-201ENST00000568699 1129 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.39□□□□□ -0.27
CXCR4P61073 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.39□□□□□ -0.27
CXCR4P61073 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 AL844908.2-201ENST00000609461 460 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 AC134684.3-201ENST00000641758 218 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.39□□□□□ -0.27
CXCR4P61073 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.39□□□□□ -0.27
CXCR4P61073 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 AC118758.2-201ENST00000614242 2813 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CXCR4P61073 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 Z98257.2-202ENST00000641138 1548 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.38□□□□□ -0.27
CXCR4P61073 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.38□□□□□ -0.27
CXCR4P61073 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 AC107890.1-201ENST00000422478 521 ntBASIC13.38□□□□□ -0.27
CXCR4P61073 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.38□□□□□ -0.27
CXCR4P61073 NUS1P3-201ENST00000423502 862 ntBASIC13.38□□□□□ -0.27
CXCR4P61073 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.38□□□□□ -0.27
CXCR4P61073 AC007969.1-201ENST00000433675 447 ntBASIC13.38□□□□□ -0.27
CXCR4P61073 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.38□□□□□ -0.27
CXCR4P61073 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.38□□□□□ -0.27
CXCR4P61073 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.38□□□□□ -0.27
CXCR4P61073 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 SORD2P-201ENST00000558556 1069 ntBASIC13.38□□□□□ -0.27
CXCR4P61073 AC140878.1-201ENST00000565277 250 ntBASIC13.38□□□□□ -0.27
CXCR4P61073 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.38□□□□□ -0.27
CXCR4P61073 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CXCR4P61073 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCR4P61073 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
CXCR4P61073 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CXCR4P61073 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCR4P61073 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms