Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ERVFC1-1P60608 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.47□□□□□ -0.57
ERVFC1-1P60608 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 VN2R19P-201ENST00000442399 1052 ntBASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC092183.1-201ENST00000469884 875 ntBASIC11.47□□□□□ -0.57
ERVFC1-1P60608 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AL138918.1-201ENST00000568306 659 ntBASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC023141.13-201ENST00000604991 943 ntBASIC11.47□□□□□ -0.57
ERVFC1-1P60608 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC010336.1-201ENST00000539278 4739 ntBASIC11.47□□□□□ -0.57
ERVFC1-1P60608 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 AL357140.3-201ENST00000639753 1983 ntBASIC11.47□□□□□ -0.57
ERVFC1-1P60608 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ERVFC1-1P60608 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 AC020910.6-201ENST00000623084 1459 ntBASIC11.46□□□□□ -0.57
ERVFC1-1P60608 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ERVFC1-1P60608 AC211486.1-202ENST00000416371 468 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms