Protein–RNA interactions for Protein: P57059

SIK1, Serine/threonine-protein kinase SIK1, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK1P57059 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC18.26■□□□□ 0.51
SIK1P57059 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.26■□□□□ 0.51
SIK1P57059 ALG1L3P-201ENST00000503331 765 ntBASIC18.26■□□□□ 0.51
SIK1P57059 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC18.26■□□□□ 0.51
SIK1P57059 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.26■□□□□ 0.51
SIK1P57059 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
SIK1P57059 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.26■□□□□ 0.51
SIK1P57059 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC18.26■□□□□ 0.51
SIK1P57059 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.26■□□□□ 0.51
SIK1P57059 AC104506.1-201ENST00000609247 429 ntBASIC18.26■□□□□ 0.51
SIK1P57059 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.26■□□□□ 0.51
SIK1P57059 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SIK1P57059 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIK1P57059 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.25■□□□□ 0.51
SIK1P57059 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 HLA-DPA2-205ENST00000433582 733 ntBASIC18.25■□□□□ 0.51
SIK1P57059 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.25■□□□□ 0.51
SIK1P57059 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.25■□□□□ 0.51
SIK1P57059 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.25■□□□□ 0.51
SIK1P57059 AL132994.1-201ENST00000554098 400 ntBASIC18.25■□□□□ 0.51
SIK1P57059 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 AC027139.1-201ENST00000565286 951 ntBASIC18.25■□□□□ 0.51
SIK1P57059 MIR4265-201ENST00000582152 99 ntBASIC18.25■□□□□ 0.51
SIK1P57059 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.25■□□□□ 0.51
SIK1P57059 DGAT2L7P-201ENST00000602462 744 ntBASIC18.25■□□□□ 0.51
SIK1P57059 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 AL109809.1-201ENST00000418979 1367 ntBASIC18.25■□□□□ 0.51
SIK1P57059 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SIK1P57059 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 MYADML-201ENST00000474610 2147 ntBASIC18.25■□□□□ 0.51
SIK1P57059 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIK1P57059 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC18.25■□□□□ 0.51
SIK1P57059 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SIK1P57059 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SIK1P57059 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.24■□□□□ 0.51
SIK1P57059 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC18.24■□□□□ 0.51
SIK1P57059 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC18.24■□□□□ 0.51
SIK1P57059 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SIK1P57059 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIK1P57059 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms