Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 AL929302.1-201ENST00000426556 871 ntBASIC12.25□□□□□ -0.45
RIPPLY3P57055 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 RN7SL173P-201ENST00000461853 292 ntBASIC12.25□□□□□ -0.45
RIPPLY3P57055 NDUFS6P1-201ENST00000485187 316 ntBASIC12.25□□□□□ -0.45
RIPPLY3P57055 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 CYP4F36P-201ENST00000589193 186 ntBASIC12.25□□□□□ -0.45
RIPPLY3P57055 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 AL672207.1-201ENST00000328462 1570 ntBASIC12.25□□□□□ -0.45
RIPPLY3P57055 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RIPPLY3P57055 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.25□□□□□ -0.45
RIPPLY3P57055 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 RNU1-114P-201ENST00000365297 166 ntBASIC12.24□□□□□ -0.45
RIPPLY3P57055 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 AL121949.3-201ENST00000406684 385 ntBASIC12.24□□□□□ -0.45
RIPPLY3P57055 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 KRT8P21-201ENST00000430398 1491 ntBASIC12.24□□□□□ -0.45
RIPPLY3P57055 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 FRMPD2B-201ENST00000431305 1347 ntBASIC12.24□□□□□ -0.45
RIPPLY3P57055 EEF1DP5-201ENST00000431410 772 ntBASIC12.24□□□□□ -0.45
RIPPLY3P57055 RPL35P9-201ENST00000446059 350 ntBASIC12.24□□□□□ -0.45
RIPPLY3P57055 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RIPPLY3P57055 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.24□□□□□ -0.45
RIPPLY3P57055 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms