Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 AC005014.1-201ENST00000432006 2976 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLDN12P56749 LINC02486-201ENST00000604157 3000 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDN12P56749 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 AL589987.1-201ENST00000453380 819 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 MEIS3P1-201ENST00000495167 958 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.8□□□□□ -0.36
CLDN12P56749 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDN12P56749 DUX4L47-201ENST00000566374 394 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 AC010327.4-202ENST00000591484 748 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 AL844908.2-201ENST00000609461 460 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDN12P56749 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 AC087499.5-201ENST00000452760 1342 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDN12P56749 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDN12P56749 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLDN12P56749 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 AL022342.1-201ENST00000400363 863 ntBASIC12.79□□□□□ -0.36
CLDN12P56749 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.79□□□□□ -0.36
CLDN12P56749 AC007969.1-201ENST00000433675 447 ntBASIC12.79□□□□□ -0.36
CLDN12P56749 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 AC026410.3-201ENST00000514280 936 ntBASIC12.79□□□□□ -0.36
CLDN12P56749 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDN12P56749 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.79□□□□□ -0.36
CLDN12P56749 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.79□□□□□ -0.36
CLDN12P56749 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN12P56749 AL049840.4-201ENST00000602422 811 ntBASIC12.79□□□□□ -0.36
CLDN12P56749 AL391069.4-201ENST00000609583 481 ntBASIC12.79□□□□□ -0.36
CLDN12P56749 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN12P56749 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLDN12P56749 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN12P56749 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLDN12P56749 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN12P56749 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CLDN12P56749 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLDN12P56749 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms