Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RNA5SP417-201ENST00000516459 108 ntBASIC16.08■□□□□ 0.16
CDK7P50613 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK7P50613 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.08■□□□□ 0.16
CDK7P50613 KRT8P1-201ENST00000557533 1207 ntBASIC16.08■□□□□ 0.16
CDK7P50613 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.08■□□□□ 0.16
CDK7P50613 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK7P50613 AC104581.4-201ENST00000623126 3052 ntBASIC16.08■□□□□ 0.16
CDK7P50613 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDK7P50613 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CDK7P50613 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK7P50613 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDK7P50613 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK7P50613 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDK7P50613 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDK7P50613 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK7P50613 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK7P50613 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK7P50613 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 NORAD-201ENST00000565493 5339 ntBASIC16.07■□□□□ 0.16
CDK7P50613 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.07■□□□□ 0.16
CDK7P50613 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.07■□□□□ 0.16
CDK7P50613 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.07■□□□□ 0.16
CDK7P50613 AC007952.4-201ENST00000573866 637 ntBASIC16.07■□□□□ 0.16
CDK7P50613 RN7SL596P-201ENST00000582123 288 ntBASIC16.07■□□□□ 0.16
CDK7P50613 AC244250.3-201ENST00000620749 366 ntBASIC16.07■□□□□ 0.16
CDK7P50613 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.07■□□□□ 0.16
CDK7P50613 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.07■□□□□ 0.16
CDK7P50613 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK7P50613 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK7P50613 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK7P50613 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK7P50613 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK7P50613 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK7P50613 AC006486.2-201ENST00000624246 2199 ntBASIC16.06■□□□□ 0.16
CDK7P50613 AC112693.3-201ENST00000624819 1983 ntBASIC16.06■□□□□ 0.16
CDK7P50613 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDK7P50613 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK7P50613 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.06■□□□□ 0.16
CDK7P50613 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.06■□□□□ 0.16
CDK7P50613 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 WASH3P-207ENST00000560956 1394 ntBASIC16.06■□□□□ 0.16
CDK7P50613 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.06■□□□□ 0.16
CDK7P50613 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK7P50613 AL512306.1-201ENST00000432698 848 ntBASIC16.06■□□□□ 0.16
CDK7P50613 PSMD4P1-201ENST00000433951 1109 ntBASIC16.06■□□□□ 0.16
CDK7P50613 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK7P50613 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDK7P50613 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.06■□□□□ 0.16
CDK7P50613 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.06■□□□□ 0.16
CDK7P50613 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms