Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.12■□□□□ 0.01
CDKN2BP42772 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.12■□□□□ 0.01
CDKN2BP42772 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2BP42772 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2BP42772 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN2BP42772 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CDKN2BP42772 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2BP42772 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN2BP42772 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2BP42772 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.12■□□□□ 0.01
CDKN2BP42772 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDKN2BP42772 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2BP42772 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2BP42772 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN2BP42772 SHC1P1-201ENST00000425230 1745 ntBASIC15.12■□□□□ 0.01
CDKN2BP42772 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2BP42772 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.11■□□□□ 0.01
CDKN2BP42772 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2BP42772 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKN2BP42772 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2BP42772 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDKN2BP42772 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKN2BP42772 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 AL355994.2-201ENST00000447882 704 ntBASIC15.11■□□□□ 0.01
CDKN2BP42772 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2BP42772 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKN2BP42772 AP000812.2-201ENST00000538934 718 ntBASIC15.11■□□□□ 0.01
CDKN2BP42772 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKN2BP42772 AL136301.1-201ENST00000615830 422 ntBASIC15.11■□□□□ 0.01
CDKN2BP42772 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2BP42772 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2BP42772 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDKN2BP42772 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDKN2BP42772 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2BP42772 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 AC097376.2-205ENST00000610159 5334 ntBASIC15.1■□□□□ 0.01
CDKN2BP42772 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN2BP42772 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN2BP42772 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN2BP42772 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.1■□□□□ 0.01
CDKN2BP42772 AGAP10P-201ENST00000454844 2418 ntBASIC15.1■□□□□ 0.01
CDKN2BP42772 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.1■□□□□ 0.01
CDKN2BP42772 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.1■□□□□ 0.01
CDKN2BP42772 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.1■□□□□ 0.01
CDKN2BP42772 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN2BP42772 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN2BP42772 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDKN2BP42772 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.1■□□□□ 0.01
CDKN2BP42772 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.1■□□□□ 0.01
CDKN2BP42772 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.1■□□□□ 0.01
CDKN2BP42772 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 AC111170.3-201ENST00000624282 2464 ntBASIC15.1■□□□□ 0.01
CDKN2BP42772 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN2BP42772 AHCYP2-201ENST00000430630 1300 ntBASIC15.1■□□□□ 0.01
CDKN2BP42772 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.1■□□□□ 0.01
CDKN2BP42772 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2BP42772 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms