Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.85□□□□□ -0.35
GDNFP39905 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.85□□□□□ -0.35
GDNFP39905 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
GDNFP39905 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.85□□□□□ -0.35
GDNFP39905 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 AL157414.3-201ENST00000624276 1954 ntBASIC12.85□□□□□ -0.35
GDNFP39905 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GDNFP39905 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
GDNFP39905 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.85□□□□□ -0.35
GDNFP39905 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.85□□□□□ -0.35
GDNFP39905 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 AC118758.2-201ENST00000614242 2813 ntBASIC12.84□□□□□ -0.35
GDNFP39905 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
GDNFP39905 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 BASP1P1-201ENST00000430708 665 ntBASIC12.84□□□□□ -0.35
GDNFP39905 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.84□□□□□ -0.35
GDNFP39905 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.84□□□□□ -0.35
GDNFP39905 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 AL512638.1-201ENST00000457493 794 ntBASIC12.84□□□□□ -0.35
GDNFP39905 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.84□□□□□ -0.35
GDNFP39905 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
GDNFP39905 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GDNFP39905 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.84□□□□□ -0.35
GDNFP39905 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.84□□□□□ -0.35
GDNFP39905 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.84□□□□□ -0.35
GDNFP39905 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GDNFP39905 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GDNFP39905 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
GDNFP39905 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
GDNFP39905 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
GDNFP39905 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.35
GDNFP39905 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.83□□□□□ -0.35
GDNFP39905 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
GDNFP39905 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.83□□□□□ -0.35
GDNFP39905 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.83□□□□□ -0.35
GDNFP39905 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.83□□□□□ -0.35
GDNFP39905 AL121723.1-201ENST00000445194 1519 ntBASIC12.83□□□□□ -0.35
GDNFP39905 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GDNFP39905 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms