Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.97□□□□□ -0.01
FDFT1P37268 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.97□□□□□ -0.01
FDFT1P37268 USP32P1-208ENST00000506594 1164 ntBASIC14.97□□□□□ -0.01
FDFT1P37268 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.97□□□□□ -0.01
FDFT1P37268 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.97□□□□□ -0.01
FDFT1P37268 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.97□□□□□ -0.01
FDFT1P37268 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
FDFT1P37268 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
FDFT1P37268 OR10B1P-201ENST00000601666 907 ntBASIC14.97□□□□□ -0.01
FDFT1P37268 AL022328.1-201ENST00000610050 478 ntBASIC14.97□□□□□ -0.01
FDFT1P37268 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 AC025048.6-201ENST00000634326 1161 ntBASIC14.97□□□□□ -0.01
FDFT1P37268 AC002472.3-201ENST00000640124 621 ntBASIC14.97□□□□□ -0.01
FDFT1P37268 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 AC009093.10-201ENST00000641956 1442 ntBASIC14.97□□□□□ -0.01
FDFT1P37268 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
FDFT1P37268 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
FDFT1P37268 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
FDFT1P37268 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.96□□□□□ -0.01
FDFT1P37268 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
FDFT1P37268 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 AC233724.13-201ENST00000598383 410 ntBASIC14.96□□□□□ -0.01
FDFT1P37268 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.96□□□□□ -0.01
FDFT1P37268 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.96□□□□□ -0.01
FDFT1P37268 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.96□□□□□ -0.01
FDFT1P37268 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FDFT1P37268 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
FDFT1P37268 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
FDFT1P37268 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FDFT1P37268 KRT8P28-201ENST00000433288 1390 ntBASIC14.96□□□□□ -0.02
FDFT1P37268 PTENP1-202ENST00000532280 3996 ntBASIC14.96□□□□□ -0.02
FDFT1P37268 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.02
FDFT1P37268 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
FDFT1P37268 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FDFT1P37268 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
FDFT1P37268 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.95□□□□□ -0.02
FDFT1P37268 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 CICP17-201ENST00000418553 2377 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms