Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CLCN1P35523 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.75■□□□□ 0.27
CLCN1P35523 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CLCN1P35523 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLCN1P35523 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN1P35523 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 AC100757.3-201ENST00000622361 1406 ntBASIC16.74■□□□□ 0.27
CLCN1P35523 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.74■□□□□ 0.27
CLCN1P35523 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN1P35523 FAM86GP-201ENST00000448322 971 ntBASIC16.74■□□□□ 0.27
CLCN1P35523 RN7SL618P-201ENST00000477850 296 ntBASIC16.74■□□□□ 0.27
CLCN1P35523 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN1P35523 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.74■□□□□ 0.27
CLCN1P35523 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN1P35523 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 REXO1L4P-201ENST00000605109 1937 ntBASIC16.74■□□□□ 0.27
CLCN1P35523 AC102953.2-201ENST00000609755 3026 ntBASIC16.74■□□□□ 0.27
CLCN1P35523 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN1P35523 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN1P35523 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN1P35523 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CLCN1P35523 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CLCN1P35523 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 KC6-207ENST00000600644 2311 ntTSL 3 BASIC16.73■□□□□ 0.27
CLCN1P35523 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 TSSK5P-201ENST00000423978 907 ntBASIC16.73■□□□□ 0.27
CLCN1P35523 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 AC044860.1-202ENST00000559481 777 ntBASIC16.73■□□□□ 0.27
CLCN1P35523 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.73■□□□□ 0.27
CLCN1P35523 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLCN1P35523 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLCN1P35523 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN1P35523 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLCN1P35523 AL445209.1-201ENST00000607269 3491 ntBASIC16.73■□□□□ 0.27
CLCN1P35523 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN1P35523 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN1P35523 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN1P35523 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN1P35523 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 PCDHB17P-202ENST00000623466 3066 ntBASIC16.72■□□□□ 0.27
CLCN1P35523 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms