Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 MBLAC2-202ENST00000514906 1936 ntBASIC17.59■□□□□ 0.41
CHMLP26374 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMLP26374 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMLP26374 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMLP26374 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMLP26374 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMLP26374 HLA-V-201ENST00000429037 534 ntBASIC17.59■□□□□ 0.41
CHMLP26374 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMLP26374 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.59■□□□□ 0.41
CHMLP26374 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMLP26374 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHMLP26374 MIR4259-201ENST00000584466 101 ntBASIC17.59■□□□□ 0.41
CHMLP26374 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMLP26374 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CHMLP26374 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMLP26374 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMLP26374 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHMLP26374 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.58■□□□□ 0.41
CHMLP26374 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
CHMLP26374 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.58■□□□□ 0.41
CHMLP26374 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMLP26374 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMLP26374 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMLP26374 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMLP26374 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CHMLP26374 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHMLP26374 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMLP26374 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMLP26374 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMLP26374 AC089987.1-201ENST00000551654 2209 ntBASIC17.58■□□□□ 0.4
CHMLP26374 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.58■□□□□ 0.4
CHMLP26374 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CHMLP26374 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMLP26374 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.58■□□□□ 0.4
CHMLP26374 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMLP26374 AC022210.1-201ENST00000449856 793 ntBASIC17.58■□□□□ 0.4
CHMLP26374 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.58■□□□□ 0.4
CHMLP26374 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMLP26374 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMLP26374 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMLP26374 HILS1-202ENST00000545329 423 ntBASIC17.58■□□□□ 0.4
CHMLP26374 MIR4741-201ENST00000579822 90 ntBASIC17.58■□□□□ 0.4
CHMLP26374 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMLP26374 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CHMLP26374 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMLP26374 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMLP26374 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMLP26374 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMLP26374 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMLP26374 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHMLP26374 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMLP26374 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMLP26374 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 AC063926.2-201ENST00000623766 1308 ntBASIC17.57■□□□□ 0.4
CHMLP26374 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMLP26374 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMLP26374 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHMLP26374 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 ST13P19-201ENST00000442505 1124 ntBASIC17.57■□□□□ 0.4
CHMLP26374 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMLP26374 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms