Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CHMP24386 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CHMP24386 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.78□□□□□ -0.2
CHMP24386 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.78□□□□□ -0.2
CHMP24386 MIR1909-201ENST00000411312 80 ntBASIC13.78□□□□□ -0.2
CHMP24386 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.78□□□□□ -0.2
CHMP24386 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 CROCCP4-201ENST00000457096 498 ntBASIC13.78□□□□□ -0.2
CHMP24386 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CHMP24386 FTH1P14-201ENST00000482930 551 ntBASIC13.78□□□□□ -0.2
CHMP24386 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 AC079316.1-201ENST00000548397 411 ntBASIC13.78□□□□□ -0.2
CHMP24386 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 AC145423.3-201ENST00000615987 467 ntBASIC13.78□□□□□ -0.2
CHMP24386 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.78□□□□□ -0.2
CHMP24386 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 LRRC59-203ENST00000576448 1531 ntBASIC13.78□□□□□ -0.2
CHMP24386 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.77□□□□□ -0.2
CHMP24386 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHMP24386 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHMP24386 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHMP24386 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHMP24386 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHMP24386 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.77□□□□□ -0.21
CHMP24386 RPL7P3-201ENST00000441388 714 ntBASIC13.77□□□□□ -0.21
CHMP24386 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 KRT223P-202ENST00000449164 1292 ntBASIC13.77□□□□□ -0.21
CHMP24386 KLF2P4-201ENST00000451959 1225 ntBASIC13.77□□□□□ -0.21
CHMP24386 PDIA3P1-201ENST00000471856 1510 ntBASIC13.77□□□□□ -0.21
CHMP24386 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 AC022616.1-201ENST00000518688 554 ntBASIC13.77□□□□□ -0.21
CHMP24386 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 AP000812.2-201ENST00000538934 718 ntBASIC13.77□□□□□ -0.21
CHMP24386 AC025279.2-201ENST00000569730 653 ntBASIC13.77□□□□□ -0.21
CHMP24386 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 GNRHR2-203ENST00000581100 1187 ntBASIC13.77□□□□□ -0.21
CHMP24386 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CHMP24386 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 COX11-210ENST00000639671 696 ntBASIC13.77□□□□□ -0.21
CHMP24386 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
CHMP24386 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.77□□□□□ -0.21
CHMP24386 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.77□□□□□ -0.21
CHMP24386 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHMP24386 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms