Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 YBX1P6-201ENST00000442962 1002 ntBASIC14.81□□□□□ -0.04
HLA-DPA1P20036 CSF2RBP1-201ENST00000447905 391 ntBASIC14.81□□□□□ -0.04
HLA-DPA1P20036 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 AC027237.1-201ENST00000560942 655 ntBASIC14.81□□□□□ -0.04
HLA-DPA1P20036 DUX4L45-201ENST00000566406 1057 ntBASIC14.81□□□□□ -0.04
HLA-DPA1P20036 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 AC099336.1-201ENST00000417053 1171 ntBASIC14.8□□□□□ -0.04
HLA-DPA1P20036 KRT223P-202ENST00000449164 1292 ntBASIC14.8□□□□□ -0.04
HLA-DPA1P20036 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 COX11-210ENST00000639671 696 ntBASIC14.8□□□□□ -0.04
HLA-DPA1P20036 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 AL023775.1-201ENST00000454907 1746 ntBASIC14.8□□□□□ -0.04
HLA-DPA1P20036 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPA1P20036 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.79□□□□□ -0.04
HLA-DPA1P20036 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms