Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ERCC2P18074 MIR6720-201ENST00000611664 98 ntBASIC15.07■□□□□ 0
ERCC2P18074 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.07■□□□□ 0
ERCC2P18074 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ERCC2P18074 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.07■□□□□ 0
ERCC2P18074 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.07■□□□□ 0
ERCC2P18074 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC2P18074 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.07■□□□□ 0
ERCC2P18074 TMBIM7P-202ENST00000641474 1516 ntBASIC15.07■□□□□ 0
ERCC2P18074 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.07■□□□□ 0
ERCC2P18074 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.07■□□□□ 0
ERCC2P18074 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.07■□□□□ 0
ERCC2P18074 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
ERCC2P18074 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.06■□□□□ 0
ERCC2P18074 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
ERCC2P18074 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 AL645933.1-201ENST00000440087 609 ntBASIC15.06■□□□□ 0
ERCC2P18074 KLF2P1-201ENST00000447438 1042 ntBASIC15.06■□□□□ 0
ERCC2P18074 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 RPSAP36-202ENST00000494591 1261 ntBASIC15.06■□□□□ 0
ERCC2P18074 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.06■□□□□ 0
ERCC2P18074 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.06■□□□□ 0
ERCC2P18074 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 AL583810.1-201ENST00000553344 1045 ntBASIC15.06■□□□□ 0
ERCC2P18074 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
ERCC2P18074 AL162426.1-201ENST00000624141 743 ntBASIC15.06■□□□□ 0
ERCC2P18074 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ERCC2P18074 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ERCC2P18074 AC020910.6-201ENST00000623084 1459 ntBASIC15.06■□□□□ 0
ERCC2P18074 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
ERCC2P18074 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.06■□□□□ 0
ERCC2P18074 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC2P18074 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ERCC2P18074 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.06■□□□□ 0
ERCC2P18074 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
ERCC2P18074 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.05■□□□□ 0
ERCC2P18074 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ERCC2P18074 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ERCC2P18074 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.05■□□□□ 0
ERCC2P18074 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.05■□□□□ 0
ERCC2P18074 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ERCC2P18074 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.05■□□□□ -0
ERCC2P18074 MTX1P1-201ENST00000440904 838 ntBASIC15.05■□□□□ -0
ERCC2P18074 HSPB1P2-201ENST00000448722 546 ntBASIC15.05■□□□□ -0
ERCC2P18074 Z93015.1-201ENST00000451718 390 ntBASIC15.05■□□□□ -0
ERCC2P18074 RPL13AP20-201ENST00000459725 609 ntBASIC15.05■□□□□ -0
ERCC2P18074 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ERCC2P18074 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.05■□□□□ -0
ERCC2P18074 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.05■□□□□ -0
ERCC2P18074 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
ERCC2P18074 AC100827.2-201ENST00000563214 1194 ntBASIC15.05■□□□□ -0
ERCC2P18074 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.05■□□□□ -0
ERCC2P18074 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.05■□□□□ -0
ERCC2P18074 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.05■□□□□ -0
ERCC2P18074 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.05■□□□□ -0
ERCC2P18074 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.05■□□□□ -0
ERCC2P18074 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ERCC2P18074 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
ERCC2P18074 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
ERCC2P18074 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms