Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGA1P17096 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.01□□□□□ -0.01
HMGA1P17096 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 AC104784.1-201ENST00000473096 294 ntBASIC15.01□□□□□ -0.01
HMGA1P17096 ALG1L13P-202ENST00000519320 584 ntBASIC15.01□□□□□ -0.01
HMGA1P17096 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 AP002803.1-201ENST00000528836 498 ntBASIC15.01□□□□□ -0.01
HMGA1P17096 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGA1P17096 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 AL031713.1-201ENST00000564813 661 ntBASIC15.01□□□□□ -0.01
HMGA1P17096 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGA1P17096 AC084781.1-201ENST00000613737 656 ntBASIC15.01□□□□□ -0.01
HMGA1P17096 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 RPL17P11-201ENST00000417593 544 ntBASIC15□□□□□ -0.01
HMGA1P17096 ORAOV1P1-201ENST00000503108 395 ntBASIC15□□□□□ -0.01
HMGA1P17096 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15□□□□□ -0.01
HMGA1P17096 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15□□□□□ -0.01
HMGA1P17096 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HMGA1P17096 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15□□□□□ -0.01
HMGA1P17096 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 MIR7845-201ENST00000618396 99 ntBASIC15□□□□□ -0.01
HMGA1P17096 AP001184.1-201ENST00000637936 376 ntBASIC15□□□□□ -0.01
HMGA1P17096 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15□□□□□ -0.01
HMGA1P17096 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 RN7SL832P-201ENST00000607781 1756 ntBASIC15□□□□□ -0.01
HMGA1P17096 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGA1P17096 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15□□□□□ -0.01
HMGA1P17096 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15□□□□□ -0.01
HMGA1P17096 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HMGA1P17096 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGA1P17096 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HMGA1P17096 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGA1P17096 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGA1P17096 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGA1P17096 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGA1P17096 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HMGA1P17096 AP002414.2-201ENST00000591780 3365 ntBASIC14.99□□□□□ -0.01
HMGA1P17096 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGA1P17096 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HMGA1P17096 MIR645-201ENST00000385283 94 ntBASIC14.99□□□□□ -0.01
HMGA1P17096 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HMGA1P17096 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGA1P17096 AC253536.4-201ENST00000440539 267 ntBASIC14.99□□□□□ -0.01
HMGA1P17096 RN7SL81P-201ENST00000493781 261 ntBASIC14.99□□□□□ -0.01
HMGA1P17096 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGA1P17096 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGA1P17096 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms