Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.31■□□□□ 0.2
CYP3A4P08684 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.31■□□□□ 0.2
CYP3A4P08684 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CYP3A4P08684 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.31■□□□□ 0.2
CYP3A4P08684 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 AL133466.1-201ENST00000447582 150 ntBASIC16.31■□□□□ 0.2
CYP3A4P08684 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.31■□□□□ 0.2
CYP3A4P08684 RN7SL530P-201ENST00000485097 298 ntBASIC16.31■□□□□ 0.2
CYP3A4P08684 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.31■□□□□ 0.2
CYP3A4P08684 MIR4754-201ENST00000582477 89 ntBASIC16.31■□□□□ 0.2
CYP3A4P08684 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.31■□□□□ 0.2
CYP3A4P08684 AC020922.3-201ENST00000595064 547 ntBASIC16.31■□□□□ 0.2
CYP3A4P08684 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 AL021578.1-201ENST00000613646 709 ntBASIC16.31■□□□□ 0.2
CYP3A4P08684 AL353770.1-201ENST00000614915 403 ntBASIC16.31■□□□□ 0.2
CYP3A4P08684 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.31■□□□□ 0.2
CYP3A4P08684 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.31■□□□□ 0.2
CYP3A4P08684 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CYP3A4P08684 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CYP3A4P08684 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYP3A4P08684 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CYP3A4P08684 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 ELK2AP-201ENST00000392510 1007 ntBASIC16.3■□□□□ 0.2
CYP3A4P08684 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.3■□□□□ 0.2
CYP3A4P08684 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.3■□□□□ 0.2
CYP3A4P08684 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.3■□□□□ 0.2
CYP3A4P08684 RN7SL258P-201ENST00000478664 300 ntBASIC16.3■□□□□ 0.2
CYP3A4P08684 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.3■□□□□ 0.2
CYP3A4P08684 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 AC242376.1-201ENST00000559033 726 ntBASIC16.3■□□□□ 0.2
CYP3A4P08684 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.3■□□□□ 0.2
CYP3A4P08684 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.3■□□□□ 0.2
CYP3A4P08684 MIR6769A-201ENST00000617340 73 ntBASIC16.3■□□□□ 0.2
CYP3A4P08684 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CYP3A4P08684 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 AC015909.3-201ENST00000572855 1794 ntBASIC16.3■□□□□ 0.2
CYP3A4P08684 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CYP3A4P08684 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.3■□□□□ 0.2
CYP3A4P08684 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms