Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.63■□□□□ 0.41
APPP05067 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.63■□□□□ 0.41
APPP05067 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.63■□□□□ 0.41
APPP05067 AL035414.1-201ENST00000451327 857 ntBASIC17.63■□□□□ 0.41
APPP05067 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 RNMTL1P1-201ENST00000454103 560 ntBASIC17.63■□□□□ 0.41
APPP05067 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.63■□□□□ 0.41
APPP05067 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.63■□□□□ 0.41
APPP05067 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
APPP05067 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.63■□□□□ 0.41
APPP05067 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 AC009955.4-201ENST00000597192 544 ntBASIC17.63■□□□□ 0.41
APPP05067 AL022328.3-201ENST00000607943 679 ntBASIC17.63■□□□□ 0.41
APPP05067 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.63■□□□□ 0.41
APPP05067 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
APPP05067 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
APPP05067 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.63■□□□□ 0.41
APPP05067 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.63■□□□□ 0.41
APPP05067 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APPP05067 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
APPP05067 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.63■□□□□ 0.41
APPP05067 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
APPP05067 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
APPP05067 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.62■□□□□ 0.41
APPP05067 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
APPP05067 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
APPP05067 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
APPP05067 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.62■□□□□ 0.41
APPP05067 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 POM121L10P-201ENST00000436994 1285 ntBASIC17.62■□□□□ 0.41
APPP05067 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.62■□□□□ 0.41
APPP05067 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.62■□□□□ 0.41
APPP05067 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.62■□□□□ 0.41
APPP05067 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.62■□□□□ 0.41
APPP05067 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 MIR4783-201ENST00000580343 82 ntBASIC17.62■□□□□ 0.41
APPP05067 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 AC132192.2-201ENST00000596206 1147 ntBASIC17.62■□□□□ 0.41
APPP05067 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.62■□□□□ 0.41
APPP05067 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.62■□□□□ 0.41
APPP05067 AL008638.5-201ENST00000623814 1298 ntBASIC17.62■□□□□ 0.41
APPP05067 AL162426.1-201ENST00000624141 743 ntBASIC17.62■□□□□ 0.41
APPP05067 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
APPP05067 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 ST20-AS1-201ENST00000560255 4223 ntBASIC17.62■□□□□ 0.41
APPP05067 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APPP05067 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
APPP05067 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
APPP05067 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
APPP05067 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
APPP05067 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 AC244394.1-201ENST00000435000 1665 ntBASIC17.61■□□□□ 0.41
APPP05067 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
APPP05067 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 AC139749.1-202ENST00000617529 3139 ntBASIC17.61■□□□□ 0.41
APPP05067 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.61■□□□□ 0.41
APPP05067 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.61■□□□□ 0.41
APPP05067 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.61■□□□□ 0.41
APPP05067 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
APPP05067 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.61■□□□□ 0.41
APPP05067 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.61■□□□□ 0.41
APPP05067 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms