Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 AC087499.5-201ENST00000452760 1342 ntBASIC11.07□□□□□ -0.64
LTAP01374 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LTAP01374 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LTAP01374 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 AL391647.1-201ENST00000395664 511 ntBASIC11.06□□□□□ -0.64
LTAP01374 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.06□□□□□ -0.64
LTAP01374 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.06□□□□□ -0.64
LTAP01374 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 AC114501.2-201ENST00000439631 535 ntBASIC11.06□□□□□ -0.64
LTAP01374 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.06□□□□□ -0.64
LTAP01374 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.06□□□□□ -0.64
LTAP01374 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.06□□□□□ -0.64
LTAP01374 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 AC092865.5-201ENST00000545435 363 ntBASIC11.06□□□□□ -0.64
LTAP01374 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.06□□□□□ -0.64
LTAP01374 AC036164.1-201ENST00000570544 333 ntBASIC11.06□□□□□ -0.64
LTAP01374 MIR4469-201ENST00000583919 79 ntBASIC11.06□□□□□ -0.64
LTAP01374 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.06□□□□□ -0.64
LTAP01374 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.06□□□□□ -0.64
LTAP01374 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.06□□□□□ -0.64
LTAP01374 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LTAP01374 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 AC009474.1-201ENST00000455096 1565 ntBASIC11.06□□□□□ -0.64
LTAP01374 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LTAP01374 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.06□□□□□ -0.64
LTAP01374 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.06□□□□□ -0.64
LTAP01374 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.06□□□□□ -0.64
LTAP01374 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LTAP01374 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LTAP01374 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.05□□□□□ -0.64
LTAP01374 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.05□□□□□ -0.64
LTAP01374 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.05□□□□□ -0.64
LTAP01374 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
LTAP01374 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LTAP01374 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.05□□□□□ -0.64
LTAP01374 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LTAP01374 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LTAP01374 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LTAP01374 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms