Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC006529.1-201ENST00000459978 637 ntBASIC20.67■□□□□ 0.9
POLR1AO95602 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 NT5C-204ENST00000578337 582 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 FBXO36P1-201ENST00000579006 471 ntBASIC20.67■□□□□ 0.9
POLR1AO95602 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 AL133467.4-201ENST00000602953 725 ntBASIC20.67■□□□□ 0.9
POLR1AO95602 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC20.67■□□□□ 0.9
POLR1AO95602 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC20.67■□□□□ 0.9
POLR1AO95602 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1AO95602 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 RER1-203ENST00000378513 3000 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1AO95602 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1AO95602 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
POLR1AO95602 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 AL591122.2-201ENST00000624125 1853 ntBASIC20.67■□□□□ 0.9
POLR1AO95602 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1AO95602 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1AO95602 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1AO95602 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.67■□□□□ 0.9
POLR1AO95602 RN7SL147P-201ENST00000487345 298 ntBASIC20.67■□□□□ 0.9
POLR1AO95602 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC20.67■□□□□ 0.9
POLR1AO95602 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
POLR1AO95602 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.67■□□□□ 0.9
POLR1AO95602 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1AO95602 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
POLR1AO95602 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1AO95602 AGGF1P1-201ENST00000509500 2073 ntBASIC20.66■□□□□ 0.9
POLR1AO95602 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR1AO95602 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR1AO95602 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR1AO95602 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR1AO95602 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR1AO95602 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR1AO95602 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 AC092896.1-201ENST00000465850 380 ntBASIC20.66■□□□□ 0.9
POLR1AO95602 AC095040.1-201ENST00000513286 675 ntBASIC20.66■□□□□ 0.9
POLR1AO95602 AL132994.1-201ENST00000554098 400 ntBASIC20.66■□□□□ 0.9
POLR1AO95602 AC142086.5-202ENST00000562500 217 ntBASIC20.66■□□□□ 0.9
POLR1AO95602 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
POLR1AO95602 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
POLR1AO95602 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1AO95602 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1AO95602 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC20.65■□□□□ 0.9
POLR1AO95602 RN7SL288P-201ENST00000490496 291 ntBASIC20.65■□□□□ 0.9
POLR1AO95602 CTBP2P6-201ENST00000526402 1229 ntBASIC20.65■□□□□ 0.9
POLR1AO95602 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR1AO95602 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR1AO95602 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR1AO95602 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 WASH7P-201ENST00000488147 1351 ntBASIC20.65■□□□□ 0.9
POLR1AO95602 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1AO95602 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
POLR1AO95602 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1AO95602 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1AO95602 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1AO95602 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms